{"id":48,"date":"2022-06-20T14:21:07","date_gmt":"2022-06-20T13:21:07","guid":{"rendered":"https:\/\/insdc.org\/?page_id=48"},"modified":"2022-07-21T14:52:25","modified_gmt":"2022-07-21T13:52:25","slug":"controlled-vocabulary-moltype-qualifier","status":"publish","type":"page","link":"https:\/\/www.insdc.org\/submitting-standards\/controlled-vocabulary-moltype-qualifier\/","title":{"rendered":"Controlled vocabulary for \/mol_type qualifier"},"content":{"rendered":"<p>This page contains the current definition, format and controlled vocabularly for mol_type qualifier.<\/p>\n<p>The page has been created on Ocober 9, 2013.<\/p>\n<p> <\/p>\n<p><strong>Qualifier<\/strong>: \/mol_type=<\/p>\n<p><strong>Definition<\/strong>: in vivo molecule type of sequence<\/p>\n<p><strong>Value format<\/strong>: “genomic DNA”, “genomic RNA”, “mRNA”, “tRNA”, “rRNA”, “other RNA”, “other DNA”, “transcribed RNA”, “viral cRNA”, “unassigned DNA”, “unassigned RNA” <\/p>\n<p><strong>Example<\/strong>: \/mol_type=”genomic DNA”<\/p>\n<p><strong>Comment<\/strong>: all values refer to the in vivo or synthetic molecule for primary entries and the<\/p>\n<p>hypothetical molecule in Third Party Data entries;<\/p>\n<p>the value “genomic DNA” does not imply that the molecule is nuclear (e.g. organelle and<\/p>\n<p>plasmid DNA should be described using “genomic DNA”); ribosomal RNA genes should be described<\/p>\n<p>using “genomic DNA”; “rRNA” should only be used if the ribosomal RNA molecule itself has been sequenced; <\/p>\n<p>\/mol_type is mandatory on every source feature key; all \/mol_type values within one entry\/record must be<\/p>\n<p>the same; values “other RNA” and “other DNA” should be applied to synthetic molecules, values<\/p>\n<p>“unassigned DNA”, “unassigned RNA” should be applied where in vivo molecule is unknown.<\/p>\n<p> <\/p>\n<pre><span class=\"Apple-style-span\" style=\"white-space: normal;\"> <\/span><\/pre>\n","protected":false},"excerpt":{"rendered":"<p>This page contains the current definition, format and controlled vocabularly for mol_type qualifier. The page has been created on Ocober 9, 2013. Qualifier: \/mol_type= Definition: in vivo molecule type of sequence Value format: “genomic DNA”, “genomic RNA”,…<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":233,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"footnotes":""},"acf":[],"_links":{"self":[{"href":"https:\/\/www.insdc.org\/wp-json\/wp\/v2\/pages\/48"}],"collection":[{"href":"https:\/\/www.insdc.org\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.insdc.org\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.insdc.org\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.insdc.org\/wp-json\/wp\/v2\/comments?post=48"}],"version-history":[{"count":1,"href":"https:\/\/www.insdc.org\/wp-json\/wp\/v2\/pages\/48\/revisions"}],"predecessor-version":[{"id":49,"href":"https:\/\/www.insdc.org\/wp-json\/wp\/v2\/pages\/48\/revisions\/49"}],"up":[{"embeddable":true,"href":"https:\/\/www.insdc.org\/wp-json\/wp\/v2\/pages\/233"}],"wp:attachment":[{"href":"https:\/\/www.insdc.org\/wp-json\/wp\/v2\/media?parent=48"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}