{"id":437,"date":"2024-05-09T11:30:52","date_gmt":"2024-05-09T10:30:52","guid":{"rendered":"https:\/\/www.insdc.org\/?page_id=437"},"modified":"2024-08-19T15:24:01","modified_gmt":"2024-08-19T14:24:01","slug":"technical-specifications","status":"publish","type":"page","link":"https:\/\/www.insdc.org\/technical-specifications\/","title":{"rendered":"Technical Specifications"},"content":{"rendered":"\n<p class=\"vf-text--body vf-text-body--2\">INSDC Members have agreed to a common set of standards and recommendations relating to the submission and validation of digital sequence information.<\/p>\n\n\n\n<p class=\"vf-text--body vf-text-body--2\">Standards or controlled vocabularies are strictly validated across INSDC Members and should be adhered to carefully by submitters.<\/p>\n\n\n\n<p class=\"vf-text--body vf-text-body--2\">Recommendations and guidelines are less strictly validated, but are useful for enhancing interoperability across submissions.<\/p>\n\n\n\n<p><\/p>\n\n\n\n<div class=\"vf-tabs\"><ul class=\"vf-tabs__list\" data-vf-js-tabs=\"true\"><li class=\"vf-tabs__item\"><a class=\"vf-tabs__link\" href=\"#vf-tabs__section-df37b2bf-1d0d-4c5c-9b5c-f28766ef1361\" data-vf-js-location-nearest-activation-target=\"\">Controlled Vocabularies and Standards<\/a><\/li><li class=\"vf-tabs__item\"><a class=\"vf-tabs__link\" href=\"#vf-tabs__section-914e0dac-6925-4fae-ac28-792234f76a18\" data-vf-js-location-nearest-activation-target=\"\">Data Representation and Documentation<\/a><\/li><li class=\"vf-tabs__item\"><a class=\"vf-tabs__link\" href=\"#vf-tabs__section-ab90e96c-1496-4a35-8614-6291dc7d6449\" data-vf-js-location-nearest-activation-target=\"\">Submission Guidelines<\/a><\/li><li class=\"vf-tabs__item\"><a class=\"vf-tabs__link\" href=\"#vf-tabs__section-dbe86227-2ada-48df-9d03-a6d15667b12e\" data-vf-js-location-nearest-activation-target=\"\">Genetic Information and Tables<\/a><\/li><\/ul><div class=\"vf-tabs-content\" data-vf-js-tabs-content=\"true\">\n<section class=\"vf-tabs__section\" id=\"vf-tabs__section-df37b2bf-1d0d-4c5c-9b5c-f28766ef1361\"><h2 class=\"vf-u-sr-only\">Controlled Vocabularies and Standards<\/h2>\n<ul class=\"has-large-font-size\">\n<li><a href=\"https:\/\/www.insdc.org\/submitting-standards\/feature-table\/\" data-type=\"URL\" data-id=\"https:\/\/dev.insdc.org\/submitting-standards\/feature-table\/\" target=\"_blank\" rel=\"noreferrer noopener\">Feature Table Document<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/www.insdc.org\/submitting-standards\/insdc-controlled-vocabularies\/\" data-type=\"page\" data-id=\"29\" target=\"_blank\" rel=\"noreferrer noopener\">INSDC controlled vocabularies<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/www.insdc.org\/submitting-standards\/missing-value-reporting\/\" data-type=\"link\" data-id=\"https:\/\/www.insdc.org\/submitting-standards\/missing-value-reporting\/\">INSDC missing value Reporting<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/www.insdc.org\/submitting-standards\/insdc-standards-genome-assembly-submission\/\" data-type=\"page\" data-id=\"136\" target=\"_blank\" rel=\"noreferrer noopener\">INSDC standards for genome assembly submission<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/www.insdc.org\/submitting-standards\/methodological-keywords\/\" data-type=\"page\" data-id=\"159\" target=\"_blank\" rel=\"noreferrer noopener\">INSDC agreed methodological keywords<\/a><\/li>\n<\/ul>\n<\/section>\n\n\n\n<section class=\"vf-tabs__section\" id=\"vf-tabs__section-914e0dac-6925-4fae-ac28-792234f76a18\"><h2 class=\"vf-u-sr-only\">Data Representation and Documentation<\/h2>\n<ul class=\"has-large-font-size\">\n<li><a href=\"https:\/\/www.insdc.org\/submitting-standards\/insdc-standards-genome-assembly-submission\/\" data-type=\"page\" data-id=\"136\" target=\"_blank\" rel=\"noreferrer noopener\">INSDC standards for genome assembly submission<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/www.insdc.org\/submitting-standards\/insdc-status-document\/\" data-type=\"page\" data-id=\"129\" target=\"_blank\" rel=\"noreferrer noopener\">INSDC Status Document<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/www.insdc.org\/submitting-standards\/xml-status\/\" data-type=\"page\" data-id=\"146\" target=\"_blank\" rel=\"noreferrer noopener\">XML Status<\/a><\/li>\n<\/ul>\n<\/section>\n\n\n\n<section class=\"vf-tabs__section\" id=\"vf-tabs__section-ab90e96c-1496-4a35-8614-6291dc7d6449\"><h2 class=\"vf-u-sr-only\">Submission Guidelines<\/h2>\n<ul class=\"has-large-font-size\">\n<li><a href=\"https:\/\/www.insdc.org\/submitting-standards\/tpa-submission-guidelines\/\" data-type=\"page\" data-id=\"142\" target=\"_blank\" rel=\"noreferrer noopener\">TPA Submission Guidelines<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/www.insdc.org\/submitting-standards\/recommendations-vocabulary-insdc-experiment-qualifiers\/\" data-type=\"page\" data-id=\"153\" target=\"_blank\" rel=\"noreferrer noopener\">Recommendations for vocabulary in INSDC Experiment Qualifiers<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/www.insdc.org\/submitting-standards\/inference-qualifiers\/\" data-type=\"page\" data-id=\"150\" target=\"_blank\" rel=\"noreferrer noopener\">Recommendations for vocabulary in INSDC Inference Qualifiers<\/a><\/li>\n\n\n\n<li><a href=\"https:\/\/www.insdc.org\/submitting-standards\/submitterseqid-qualifier-recommendation-document\/\" data-type=\"page\" data-id=\"156\" target=\"_blank\" rel=\"noreferrer noopener\">Recommendation for Submitter seqid Qualifiers<\/a><\/li>\n<\/ul>\n<\/section>\n\n\n\n<section class=\"vf-tabs__section\" id=\"vf-tabs__section-dbe86227-2ada-48df-9d03-a6d15667b12e\"><h2 class=\"vf-u-sr-only\">Genetic Information and Tables<\/h2>\n<ul class=\"has-large-font-size\">\n<li><a href=\"https:\/\/www.insdc.org\/submitting-standards\/genetic-code-tables\/\" data-type=\"page\" data-id=\"126\" target=\"_blank\" rel=\"noreferrer noopener\">Genetic code tables<\/a><\/li>\n<\/ul>\n<\/section>\n<\/div><\/div>\n","protected":false},"excerpt":{"rendered":"<p>INSDC Members have agreed to a common set of standards and recommendations relating to the submission and validation of digital sequence information. Standards or controlled vocabularies are strictly validated across INSDC Members and should be adhered to carefully by submitters. Recommendations…<\/p>\n","protected":false},"author":6,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"footnotes":""},"acf":[],"_links":{"self":[{"href":"https:\/\/www.insdc.org\/wp-json\/wp\/v2\/pages\/437"}],"collection":[{"href":"https:\/\/www.insdc.org\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.insdc.org\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.insdc.org\/wp-json\/wp\/v2\/users\/6"}],"replies":[{"embeddable":true,"href":"https:\/\/www.insdc.org\/wp-json\/wp\/v2\/comments?post=437"}],"version-history":[{"count":7,"href":"https:\/\/www.insdc.org\/wp-json\/wp\/v2\/pages\/437\/revisions"}],"predecessor-version":[{"id":643,"href":"https:\/\/www.insdc.org\/wp-json\/wp\/v2\/pages\/437\/revisions\/643"}],"wp:attachment":[{"href":"https:\/\/www.insdc.org\/wp-json\/wp\/v2\/media?parent=437"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}